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» A New Architecture for Automated Modelling
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NIPS
2007
13 years 9 months ago
Mining Internet-Scale Software Repositories
Large repositories of source code create new challenges and opportunities for statistical machine learning. Here we first develop Sourcerer, an infrastructure for the automated c...
Erik Linstead, Paul Rigor, Sushil Krishna Bajracha...
SIGMOD
2010
ACM
250views Database» more  SIGMOD 2010»
13 years 7 months ago
Expressive and flexible access to web-extracted data: a keyword-based structured query language
Automated extraction of structured data from Web sources often leads to large heterogeneous knowledge bases (KB), with data and schema items numbering in the hundreds of thousands...
Jeffrey Pound, Ihab F. Ilyas, Grant E. Weddell
BMCBI
2007
134views more  BMCBI 2007»
13 years 7 months ago
Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
BMCBI
2007
165views more  BMCBI 2007»
13 years 7 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
BMCBI
2007
116views more  BMCBI 2007»
13 years 7 months ago
Clustering protein environments for function prediction: finding PROSITE motifs in 3D
Background: Structural genomics initiatives are producing increasing numbers of threedimensional (3D) structures for which there is little functional information. Structure-based ...
Sungroh Yoon, Jessica C. Ebert, Eui-Young Chung, G...