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BMCBI
2011
13 years 6 months ago
PICS-Ord: Unlimited Coding of Ambiguous Regions by Pairwise Identity and Cost Scores Ordination
Background: We present a novel method to encode ambiguously aligned regions in fixed multiple sequence alignments by ‘Pairwise Identity and Cost Scores Ordination’ (PICS-Ord)....
Robert K. Luecking, Brendan P. Hodkinson, Alexandr...
BMCBI
2011
13 years 6 months ago
DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
Jesse Eickholt, Xin Deng, Jianlin Cheng
BMCBI
2011
13 years 6 months ago
The dChip survival analysis module for microarray data
Background: Genome-wide expression signatures are emerging as potential marker for overall survival and disease recurrence risk as evidenced by recent commercialization of gene ex...
Samir B. Amin, Parantu K. Shah, Aimin Yan, Sophia ...
CONSTRAINTS
2011
13 years 6 months ago
Solving Steel Mill Slab Problems with constraint-based techniques: CP, LNS, and CBLS
The Steel Mill Slab Problem is an optimization benchmark that has been studied for a long time in the constraint-programming community but was only solved efficiently in the two l...
Pierre Schaus, Pascal Van Hentenryck, Jean-Noë...
CORR
2011
Springer
209views Education» more  CORR 2011»
13 years 5 months ago
Aneka Cloud Application Platform and Its Integration with Windows Azure
Aneka is an Application Platform-as-a-Service (Aneka PaaS) for Cloud Computing. It acts as a framework for building customized applications and deploying them on either public or ...
Yi Wei, Karthik Sukumar, Christian Vecchiola, Dile...
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