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BMCBI
2007
102views more  BMCBI 2007»
13 years 10 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
TCBB
2011
13 years 5 months ago
Graph Comparison by Log-Odds Score Matrices with Application to Protein Topology Analysis
A TOPS diagram is a simplified description of the topology of a protein using a graph where nodes are α-helices and β-strands, and edges correspond to chirality relations and p...
J. Rocha
DTJ
1998
171views more  DTJ 1998»
13 years 10 months ago
Measurement and Analysis of C and C++ Performance
ir increasing use of abstraction, modularity, delayed binding, polymorphism, and source reuse, especially when these attributes are used in combination. Modern processor architectu...
Hemant G. Rotithor, Kevin W. Harris, Mark W. Davis
MAM
2007
157views more  MAM 2007»
13 years 10 months ago
Executing large algorithms on low-capacity FPGAs using flowpath partitioning and runtime reconfiguration
This paper describes a new method of executing a software program on an FPGA for embedded systems. Rather than combine reconfigurable logic with a microprocessor core, this method...
Darrin M. Hanna, Michael DuChene
QNS
1996
14 years 3 days ago
Real Inferno
Inferno is an operating system well suited to applications that need to be portable, graphical, and networked. This paper describes the fundamental oating point facilities of the...
Eric Grosse