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» A New Similarity Measure among Protein Sequences
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ALMOB
2006
135views more  ALMOB 2006»
13 years 9 months ago
P-value based visualization of codon usage data
Two important and not yet solved problems in bacterial genome research are the identification of horizontally transferred genes and the prediction of gene expression levels. Both ...
Peter Meinicke, Thomas Brodag, Wolfgang Florian Fr...
ACL
2003
13 years 10 months ago
Word Sense Disambiguation Using Pairwise Alignment
In this paper, we proposed a new supervised word sense disambiguation (WSD) method based on a pairwise alignment technique, which is used generally to measure a similarity between...
Koichi Yamashita, Keiichi Yoshida, Yukihiro Itoh
BMCBI
2007
153views more  BMCBI 2007»
13 years 9 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
BMCBI
2007
116views more  BMCBI 2007»
13 years 9 months ago
Clustering protein environments for function prediction: finding PROSITE motifs in 3D
Background: Structural genomics initiatives are producing increasing numbers of threedimensional (3D) structures for which there is little functional information. Structure-based ...
Sungroh Yoon, Jessica C. Ebert, Eui-Young Chung, G...
WISE
2008
Springer
14 years 3 months ago
Web-Based Measure of Semantic Relatedness
Semantic relatedness measures quantify the degree in which some words or concepts are related, considering not only similarity but any possible semantic relationship among them. Re...
Jorge Gracia, Eduardo Mena