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» A New Similarity Measure among Protein Sequences
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BMCBI
2007
122views more  BMCBI 2007»
13 years 9 months ago
TAP score: torsion angle propensity normalization applied to local protein structure evaluation
Background: Experimentally determined protein structures may contain errors and require validation. Conformational criteria based on the Ramachandran plot are mainly used to disti...
Silvio C. E. Tosatto, Roberto Battistutta
BMCBI
2010
128views more  BMCBI 2010»
13 years 9 months ago
VIGOR, an annotation program for small viral genomes
Background: The decrease in cost for sequencing and improvement in technologies has made it easier and more common for the re-sequencing of large genomes as well as parallel seque...
Shiliang Wang, Jaideep P. Sundaram, David Spiro
BMCBI
2010
118views more  BMCBI 2010»
13 years 9 months ago
Bacillus anthracis genome organization in light of whole transcriptome sequencing
Emerging knowledge of whole prokaryotic transcriptomes could validate a number of theoretical concepts introduced in the early days of genomics. What are the rules connecting gene...
Jeffrey Martin, Wenhan Zhu, Karla D. Passalacqua, ...
CSB
2005
IEEE
126views Bioinformatics» more  CSB 2005»
14 years 2 months ago
Visualization of Logic Analysis of Phylogenetic Profiles (LAPP)
Recently Bowers et al. [1] analyzed triplet logic relationships among 4873 Clusters of Orthologous Groups (COGS) from 67 fully sequenced organisms by calculating how well logic re...
Kay A. Robbins, Li Zhao
ICIP
2003
IEEE
14 years 10 months ago
A hidden Markov model based framework for recognition of humans from gait sequences
In this paper we propose a generic framework based on Hidden Markov Models (HMMs) for recognition of individuals from their gait. The HMM framework is suitable, because the gait o...
Aravind Sundaresan, Amit K. Roy Chowdhury, Rama Ch...