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» A Noisy-Channel Approach to Question Answering
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CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
14 years 2 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...
TACAS
2005
Springer
108views Algorithms» more  TACAS 2005»
14 years 1 months ago
On Some Transformation Invariants Under Retiming and Resynthesis
Transformations using retiming and resynthesis operations are the most important and practical (if not the only) techniques used in optimizing synchronous hardware systems. Althoug...
Jie-Hong Roland Jiang
BMCBI
2008
211views more  BMCBI 2008»
13 years 8 months ago
CPSP-tools - Exact and complete algorithms for high-throughput 3D lattice protein studies
Background: The principles of protein folding and evolution pose problems of very high inherent complexity. Often these problems are tackled using simplified protein models, e.g. ...
Martin Mann, Sebastian Will, Rolf Backofen
BMCBI
2007
148views more  BMCBI 2007»
13 years 8 months ago
Computation of significance scores of unweighted Gene Set Enrichment Analyses
Background: Gene Set Enrichment Analysis (GSEA) is a computational method for the statistical evaluation of sorted lists of genes or proteins. Originally GSEA was developed for in...
Andreas Keller, Christina Backes, Hans-Peter Lenho...
SPEECH
2002
112views more  SPEECH 2002»
13 years 8 months ago
Relating dialogue games to information state
This paper1 discusses the use of `conversational' or `dialogue games' as a basis for building dialogue systems. We give a tutorial overview of some recent attempts to re...
Stephen G. Pulman