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ALMOB
2006
138views more  ALMOB 2006»
13 years 9 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
FPGA
2000
ACM
168views FPGA» more  FPGA 2000»
14 years 14 days ago
A benchmark suite for evaluating configurable computing systems--status, reflections, and future directions
This paper presents a benchmark suite for evaluating a configurable computing system's infrastructure, both tools and architecture. A novel aspect of this work is the use of ...
S. Kumar, Luiz Pires, Subburajan Ponnuswamy, C. Na...
BMCBI
2007
133views more  BMCBI 2007»
13 years 9 months ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
GECCO
2010
Springer
189views Optimization» more  GECCO 2010»
14 years 1 months ago
Knowledge mining with genetic programming methods for variable selection in flavor design
This paper presents a novel approach for knowledge mining from a sparse and repeated measures dataset. Genetic programming based symbolic regression is employed to generate multip...
Katya Vladislavleva, Kalyan Veeramachaneni, Matt B...
CEC
2010
IEEE
13 years 6 months ago
Active Learning Genetic programming for record deduplication
The great majority of genetic programming (GP) algorithms that deal with the classification problem follow a supervised approach, i.e., they consider that all fitness cases availab...
Junio de Freitas, Gisele L. Pappa, Altigran Soares...