77 search results - page 9 / 16 » A Parallel, Out-of-Core Algorithm for RNA Secondary Structur... |
ICDM
2007
IEEE
14 years 1 months ago
2007
IEEE
— RNA molecules are distinguished by their sequence composition and by their three-dimensional shape, called the secondary structure. The secondary structure of a pre-mRNA sequen...
ICASSP
2008
IEEE
14 years 1 months ago
2008
IEEE
We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
BMCBI
2005
13 years 7 months ago
2005
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
BIOSURVEILLANCE
2007
Springer
14 years 1 months ago
2007
Springer
Abstract. Conserved regions, or motifs, present among RNA secondary structures serve as a useful indicator for predicting the functionality of the RNA molecules. Automated detectio...
IJBRA
2006
13 years 7 months ago
2006
: Stochastic Context-Free Grammars (SCFG) has been shown to be effective in modelling RNA secondary structure for searches. Our previous work (Cai et al., 2003) in Stochastic Paral...