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» A Parallel Algorithm for Computer Simulation of Electrocardi...
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SC
2004
ACM
14 years 1 months ago
A Parallel Visualization Pipeline for Terascale Earthquake Simulations
This paper presents a parallel visualization pipeline implemented at the Pittsburgh Supercomputing Center (PSC) for studying the largest earthquake simulation ever performed. The ...
Hongfeng Yu, Kwan-Liu Ma, Joel Welling
BMCBI
2011
13 years 2 months ago
DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI
Background: Next-generation sequencing technologies have led to the high-throughput production of sequence data (reads) at low cost. However, these reads are significantly shorter...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
IPPS
2005
IEEE
14 years 1 months ago
Message Scheduling for All-to-All Personalized Communication on Ethernet Switched Clusters
We develop a message scheduling scheme that can theoretically achieve the maximum throughput for all–to–all personalized communication (AAPC) on any given Ethernet switched cl...
Ahmad Faraj, Xin Yuan
ICPPW
2005
IEEE
14 years 1 months ago
A Practical Approach to the Rating of Barrier Algorithms Using the LogP Model and Open MPI
Large–scale parallel applications performing global synchronization may spend a significant amount of execution time waiting for the completion of a barrier operation. Conseque...
Torsten Hoefler, Lavinio Cerquetti, Torsten Mehlan...
FMICS
2007
Springer
14 years 1 months ago
An Approach to Formalization and Analysis of Message Passing Libraries
Message passing using libraries implementing the Message Passing Interface (MPI) standard is the dominant communication mechanism in high performance computing (HPC) applications. ...
Robert Palmer, Michael Delisi, Ganesh Gopalakrishn...