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ISHPC
2003
Springer
14 years 21 days ago
Performance Study of a Whole Genome Comparison Tool on a Hyper-Threading Multiprocessor
We developed a multithreaded parallel implementation of a sequence alignment algorithm that is able to align whole genomes with reliable output and reasonable cost. This paper pres...
Juan del Cuvillo, Xinmin Tian, Guang R. Gao, Milin...
ANCS
2009
ACM
13 years 5 months ago
Range Tries for scalable address lookup
In this paper we introduce the Range Trie, a new multiway tree data structure for address lookup. Each Range Trie node maps to an address range [Na, Nb) and performs multiple comp...
Ioannis Sourdis, Georgios Stefanakis, Ruben de Sme...
PODC
2011
ACM
12 years 10 months ago
A nonblocking set optimized for querying the minimum value
We present the Mindicator, a set implementation customized for shared memory runtime systems. The Mindicator is optimized for constant-time querying of its minimum element, while ...
Yujie Liu, Michael F. Spear
PC
2007
284views Management» more  PC 2007»
13 years 7 months ago
Implementation and evaluation of shared-memory communication and synchronization operations in MPICH2 using the Nemesis communic
This paper presents the implementation of MPICH2 over the Nemesis communication subsystem and the evaluation of its shared-memory performance. We describe design issues as well as...
Darius Buntinas, Guillaume Mercier, William Gropp
IPPS
2007
IEEE
14 years 1 months ago
MultiEdge: An Edge-based Communication Subsystem for Scalable Commodity Servers
At the core of contemporary high performance computer systems is the communication infrastructure. For this reason, there has been a lot of work on providing low-latency, high-ban...
Sven Karlsson, Stavros Passas, George Kotsis, Ange...