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SAC
2009
ACM
14 years 3 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
ESTIMEDIA
2009
Springer
13 years 6 months ago
Inter-kernel data reuse and pipelining on chip-multiprocessors for multimedia applications
The increasing demand for low power and high performance multimedia embedded systems has motivated the need for effective solutions to satisfy application bandwidth and latency req...
Luis Angel D. Bathen, Yongjin Ahn, Nikil D. Dutt, ...
IPPS
2007
IEEE
14 years 3 months ago
A Power-Aware Prediction-Based Cache Coherence Protocol for Chip Multiprocessors
Snoopy cache coherence protocols broadcast requests to all nodes, reducing the latency of cache to cache transfer misses at the expense of increasing interconnect power. We propos...
Ehsan Atoofian, Amirali Baniasadi
PLDI
2004
ACM
14 years 2 months ago
Min-cut program decomposition for thread-level speculation
With billion-transistor chips on the horizon, single-chip multiprocessors (CMPs) are likely to become commodity components. Speculative CMPs use hardware to enforce dependence, al...
Troy A. Johnson, Rudolf Eigenmann, T. N. Vijaykuma...
MAGS
2007
100views more  MAGS 2007»
13 years 8 months ago
Engineering agent-mediated integration of bioinformatics analysis tools
Abstract. The availability of massive amounts of biological data, distributed in various data sources, has prompted the development of a wide range of data analysis tools. However,...
Vassilis Koutkias, Andigoni Malousi, Nicos Maglave...