Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
— We discuss the problem of resource provisioning for database management systems operating on top of an Infrastructure-As-A-Service (IaaS) cloud. To solve this problem, we descr...
We are building a knowledge base (KB) of published structural data on the 30s ribosomal subunit in prokaryotes. Our KB is distinguished by a standardized representation of biologi...
Russ B. Altman, Neil F. Abernethy, Richard O. Chen
The prediction of protein function as well as the reconstruction of evolutionary genesis employing sequence comparison at large is still the most powerful tool in sequence analysi...
We introduce and investigate a distributed computation model for querying the Web. Web queries are computed by interacting automata running at different nodes in the Web. The auto...
Marc Spielmann, Jerzy Tyszkiewicz, Jan Van den Bus...