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» A Query System in a Biological Database
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SIGMOD
1992
ACM
160views Database» more  SIGMOD 1992»
15 years 7 months ago
Extensible/Rule Based Query Rewrite Optimization in Starburst
This paper describes the Query Rewrite facility of the Starburst extensible database system, a novel phase of query optimization. We present a suite of rewrite rules used in Starb...
Hamid Pirahesh, Joseph M. Hellerstein, Waqar Hasan
BMCBI
2008
163views more  BMCBI 2008»
15 years 3 months ago
The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
Background: High-throughput genome biological experiments yield large and multifaceted datasets that require flexible and user-friendly analysis tools to facilitate their interpre...
Frédéric Chalmel, Michael Primig
JIDM
2010
131views more  JIDM 2010»
14 years 10 months ago
Processing Queries over Distributed XML Databases
The increasing volume of data stored as XML documents makes fragmentation techniques an alternative to the performance issues in query processing. Fragmented databases are feasible...
Guilherme Figueiredo, Vanessa P. Braganholo, Marta...
TCS
2008
15 years 3 months ago
GemCell: A generic platform for modeling multi-cellular biological systems
The mass and complexity of biological information requires computer-aided simulation and analysis to help scientists achieve understanding and guide experimentation. Although livi...
Hila Amir-Kroll, Avital Sadot, Irun R. Cohen, Davi...
BMCBI
2006
190views more  BMCBI 2006»
15 years 3 months ago
VANTED: A system for advanced data analysis and visualization in the context of biological networks
Background: Recent advances with high-throughput methods in life-science research have increased the need for automatized data analysis and visual exploration techniques. Sophisti...
Björn H. Junker, Christian Klukas, Falk Schre...