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» A Relational Genomics Search Engine
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ICDE
2002
IEEE
232views Database» more  ICDE 2002»
14 years 8 months ago
DBXplorer: A System for Keyword-Based Search over Relational Databases
Internet search engines have popularized the keywordbased search paradigm. While traditional database management systems offer powerful query languages, they do not allow keyword-...
Sanjay Agrawal, Surajit Chaudhuri, Gautam Das
BIBE
2007
IEEE
121views Bioinformatics» more  BIBE 2007»
14 years 1 months ago
Identifying Genomic Regulators of Set-Wise Co-Expression
The genetical genomics approach has been used to study the genetic basis of variation in gene expression, where putative transcriptional regulators of genes are identified via gene...
Jung Hoon Woo, Tian Zheng, Ju Han Kim
NAR
2010
174views more  NAR 2010»
13 years 2 months ago
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum
BeetleBase (http://www.beetlebase.org) has been updated to provide more comprehensive genomic information for the red flour beetle Tribolium castaneum. The database contains genom...
Hee Shin Kim, Terence Murphy, Jing Xia, Doina Cara...
XIMEP
2005
ACM
188views Database» more  XIMEP 2005»
14 years 1 months ago
Building a Scalable Native XML Database Engine on Infrastructure for a Relational Database
We describe the architecture and some aspects of System R/X, a native XML database engine that is built on the same mature infrastructure for a relational database and integrated ...
Guogen Zhang
BMCBI
2008
128views more  BMCBI 2008»
13 years 7 months ago
Efficient computation of absent words in genomic sequences
Background: Analysis of sequence composition is a routine task in genome research. Organisms are characterized by their base composition, dinucleotide relative abundance, codon us...
Julia Herold, Stefan Kurtz, Robert Giegerich