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» A Repulsive Clustering Algorithm for Gene Expression Data
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PAKDD
2010
ACM
203views Data Mining» more  PAKDD 2010»
14 years 13 days ago
Finding Itemset-Sharing Patterns in a Large Itemset-Associated Graph
Both itemset mining and graph mining have been studied independently. Here, we introduce a novel data structure, which is an unweighted graph whose vertices contain itemsets. From ...
Mutsumi Fukuzaki, Mio Seki, Hisashi Kashima, Jun S...
BMCBI
2006
374views more  BMCBI 2006»
13 years 7 months ago
AMDA: an R package for the automated microarray data analysis
Background: Microarrays are routinely used to assess mRNA transcript levels on a genome-wide scale. Large amount of microarray datasets are now available in several databases, and...
Mattia Pelizzola, Norman Pavelka, Maria Foti, Paol...
CVPR
2008
IEEE
14 years 9 months ago
Constrained spectral clustering through affinity propagation
Pairwise constraints specify whether or not two samples should be in one cluster. Although it has been successful to incorporate them into traditional clustering methods, such as ...
Miguel Á. Carreira-Perpiñán, ...
BMCBI
2005
106views more  BMCBI 2005»
13 years 7 months ago
ESTree db: a Tool for Peach Functional Genomics
Background: The ESTree db http://www.itb.cnr.it/estree/ represents a collection of Prunus persica expressed sequenced tags (ESTs) and is intended as a resource for peach functiona...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
BMCBI
2007
139views more  BMCBI 2007»
13 years 7 months ago
Bioinformatics analysis of the early inflammatory response in a rat thermal injury model
Background: Thermal injury is among the most severe forms of trauma and its effects are both local and systemic. Response to thermal injury includes cellular protection mechanisms...
Eric Yang, Timothy Maguire, Martin L. Yarmush, Fra...