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» A Sequence Alignment Model Based on the Averaged Perceptron
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MICCAI
2003
Springer
14 years 8 months ago
A High Resolution Dynamic Heart Model Based on Averaged MRI Data
We are in the process of constructing a high resolution, high signal to noise ratio (SNR) dynamic MRI dataset for the human heart using methodology similar to that employed to cons...
John Moore, Maria Drangova, Marcin Wierzbicki, Ter...
BMCBI
2006
137views more  BMCBI 2006»
13 years 8 months ago
Sigma: multiple alignment of weakly-conserved non-coding DNA sequence
Background: Existing tools for multiple-sequence alignment focus on aligning protein sequence or protein-coding DNA sequence, and are often based on extensions to Needleman-Wunsch...
Rahul Siddharthan
BMCBI
2007
130views more  BMCBI 2007»
13 years 8 months ago
HMM-ModE - Improved classification using profile hidden Markov models by optimising the discrimination threshold and modifying e
Background: Profile Hidden Markov Models (HMM) are statistical representations of protein families derived from patterns of sequence conservation in multiple alignments and have b...
Prashant K. Srivastava, Dhwani K. Desai, Soumyadee...
BMCBI
2008
132views more  BMCBI 2008»
13 years 8 months ago
The Average Mutual Information Profile as a Genomic Signature
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
Mark Bauer, Sheldon M. Schuster, Khalid Sayood
ACL
2009
13 years 5 months ago
A non-contiguous Tree Sequence Alignment-based Model for Statistical Machine Translation
The tree sequence based translation model allows the violation of syntactic boundaries in a rule to capture non-syntactic phrases, where a tree sequence is a contiguous sequence o...
Jun Sun, Min Zhang, Chew Lim Tan