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RECOMB
2010
Springer
13 years 6 months ago
An Approximation Algorithm for Computing a Parsimonious First Speciation in the Gene Duplication Model
We consider the following problem: given a forest of gene family trees on a set of genomes, find a first speciation which splits these genomes into two subsets and minimizes the ...
Aïda Ouangraoua, Krister M. Swenson, Cedric C...
EGH
2004
Springer
13 years 11 months ago
Understanding the efficiency of GPU algorithms for matrix-matrix multiplication
Utilizing graphics hardware for general purpose numerical computations has become a topic of considerable interest. The implementation of streaming algorithms, typified by highly ...
Kayvon Fatahalian, Jeremy Sugerman, Pat Hanrahan
PVLDB
2008
154views more  PVLDB 2008»
13 years 7 months ago
Indexing land surface for efficient kNN query
The class of k Nearest Neighbor (kNN) queries is frequently used in geospatial applications. Many studies focus on processing kNN in Euclidean and road network spaces. Meanwhile, ...
Cyrus Shahabi, Lu-An Tang, Songhua Xing
ICCS
2007
Springer
13 years 11 months ago
Efficient Implementation of an Optimal Interpolator for Large Spatial Data Sets
Abstract. Interpolating scattered data points is a problem of wide ranging interest. One of the most popular interpolation methods in geostatistics is ordinary kriging. The price f...
Nargess Memarsadeghi, David M. Mount
CAV
1998
Springer
98views Hardware» more  CAV 1998»
14 years 2 days ago
Verification of Timed Systems Using POSETs
This paper presents a new algorithm for efficiently verifying timed systems. The new algorithm represents timing information using geometric regions and explores the timed state sp...
Wendy Belluomini, Chris J. Myers