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» A Sticker-Based Model for DNA Computation
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BMCBI
2007
164views more  BMCBI 2007»
13 years 7 months ago
Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks
Background: The regulation of gene expression is achieved through gene regulatory networks (GRNs) in which collections of genes interact with one another and other substances in a...
Peng Li, Chaoyang Zhang, Edward J. Perkins, Ping G...
RECOMB
2001
Springer
14 years 8 months ago
Fast recovery of evolutionary trees with thousands of nodes
We present a novel distance-based algorithm for evolutionary tree reconstruction. Our algorithm reconstructs the topology of a tree with n leaves in O(n2 ) time using O(n) working...
Miklós Csürös
CIE
2010
Springer
14 years 13 days ago
Approximate Self-assembly of the Sierpinski Triangle
The Tile Assembly Model is a Turing universal model that Winfree introduced in order to study the nanoscale self-assembly of complex (typically aperiodic) DNA crystals. Winfree ex...
Jack H. Lutz, Brad Shutters
BMCBI
2007
197views more  BMCBI 2007»
13 years 7 months ago
Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
Background: Boolean network (BN) modeling is a commonly used method for constructing gene regulatory networks from time series microarray data. However, its major drawback is that...
Haseong Kim, Jae K. Lee, Taesung Park
ICS
2010
Tsinghua U.
13 years 11 months ago
Memory Consistency Conditions for Self-Assembly Programming
: Perhaps the two most significant theoretical questions about the programming of self-assembling agents are: (1) necessary and sufficient conditions to produce a unique terminal a...
Aaron Sterling