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WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
14 years 2 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
PG
2007
IEEE
14 years 4 months ago
Genus Oblivious Cross Parameterization: Robust Topological Management of Inter-Surface Maps
We consider the problem of generating a map between two triangulated meshes, M and M’, with arbitrary and possibly differing genus. This problem has rarely been tackled in its g...
Janine Bennett, Valerio Pascucci, Kenneth I. Joy
BMCBI
2007
118views more  BMCBI 2007»
13 years 10 months ago
A topological algorithm for identification of structural domains of proteins
Background: Identification of the structural domains of proteins is important for our understanding of the organizational principles and mechanisms of protein folding, and for ins...
Frank Emmert-Streib, Arcady R. Mushegian
CORR
2010
Springer
99views Education» more  CORR 2010»
13 years 10 months ago
On Equivalence Between Network Topologies
One major open problem in network coding is to characterize the capacity region of a general multi-source multi-demand network. There are some existing computational tools for boun...
Michelle Effros, Tracey Ho, Shirin Jalali
MKM
2009
Springer
14 years 4 months ago
A Linear Grammar Approach to Mathematical Formula Recognition from PDF
Many approaches have been proposed over the years for the recognition of mathematical formulae from scanned documents. More recently a need has arisen to recognise formulae from PD...
Josef B. Baker, Alan P. Sexton, Volker Sorge