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CMSB
2004
Springer
15 years 9 months ago
Modelling Metabolic Pathways Using Stochastic Logic Programs-Based Ensemble Methods
In this paper we present a methodology to estimate rates of enzymatic reactions in metabolic pathways. Our methodology is based on applying stochastic logic learning in ensemble le...
Huma Lodhi, Stephen Muggleton
ICLP
2010
Springer
15 years 7 months ago
Improving the Efficiency of Gibbs Sampling for Probabilistic Logical Models by Means of Program Specialization
Abstract. There is currently a large interest in probabilistic logical models. A popular algorithm for approximate probabilistic inference with such models is Gibbs sampling. From ...
Daan Fierens
APLAS
2004
ACM
15 years 10 months ago
A Relational Model for Object-Oriented Designs
This paper develops a mathematical characterisation of object-oriented concepts by defining an observation-oriented semantics for an object-oriented language (OOL) with a rich var...
Jifeng He, Zhiming Liu, Xiaoshan Li, Shengchao Qin
AINA
2009
IEEE
15 years 11 months ago
Towards a Rational Approach for the Logical Modelling of Inhibition in Metabolic Networks
—This paper makes two contributions towards the logical modelling of inhibition in metabolic networks. First it exposes the logical inconsistency of an existing state-of-the-art ...
Oliver Ray
BMCBI
2006
120views more  BMCBI 2006»
15 years 4 months ago
A factor analysis model for functional genomics
Background: Expression array data are used to predict biological functions of uncharacterized genes by comparing their expression profiles to those of characterized genes. While b...
Rafal Kustra, Romy Shioda, Mu Zhu