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BMCBI
2011
13 years 3 months ago
Hierarchical graphs for rule-based modeling of biochemical systems
Background: In rule-based modeling, graphs are used to represent molecules: a colored vertex represents a component of a molecule, a vertex attribute represents the internal state...
Nathan W. Lemons, Bin Hu, William S. Hlavacek
TREC
2003
13 years 10 months ago
Knowledge-Based Access to the Bio-Medical Literature, Ontologically-Grounded Experiments for the TREC 2003 Genomics Track
The Tarragon Consulting team participated in the primary task of the TREC 2003 Genomics Track. We used a combination of knowledge-engineering and corpus analysis to construct sema...
Richard Tong, John Quackenbush, Mark Snuffin
SEMWEB
2009
Springer
14 years 3 months ago
Towards a Graphical Notation for OWL 2
The Ontology Definition Metamodel (ODM) defines a set of UML metamodels and profiles for development of RDF and OWL. The UML profiles in the ODM specification adapt UML notations t...
Elisa F. Kendall, Roy Bell, Roger Burkhart, Mark D...
ECOOP
2009
Springer
14 years 9 months ago
Featherweight Jigsaw: A Minimal Core Calculus for Modular Composition of Classes
We present FJig, a simple calculus where basic building blocks are classes in the style of Featherweight Java, declaring elds, methods and one constructor. However, inheritance has...
Giovanni Lagorio, Marco Servetto, Elena Zucca
WSDM
2010
ACM
265views Data Mining» more  WSDM 2010»
14 years 6 months ago
Data-oriented Content Query System: Searching for Data into Text on the Web
As the Web provides rich data embedded in the immense contents inside pages, we witness many ad-hoc efforts for exploiting fine granularity information across Web text, such as We...
Kevin Chen-Chuan Chang, Mianwei Zhou, Tao Cheng