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» A cluster validity framework for genome expression data
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147
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BMCBI
2007
198views more  BMCBI 2007»
15 years 3 months ago
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...
159
Voted
BMCBI
2005
130views more  BMCBI 2005»
15 years 3 months ago
Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome
Background: This paper addresses the problem of recognising DNA cis-regulatory modules which are located far from genes. Experimental procedures for this are slow and costly, and ...
Irina I. Abnizova, Rene te Boekhorst, Klaudia Walt...
131
Voted
RECOMB
2003
Springer
16 years 4 months ago
Whole-genome comparative annotation and regulatory motif discovery in multiple yeast species
In [13] we reported the genome sequences of S. paradoxus, S. mikatae and S. bayanus and compared these three yeast species to their close relative, S. cerevisiae. Genome-wide comp...
Manolis Kamvysselis, Nick Patterson, Bruce Birren,...
134
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OTM
2005
Springer
15 years 9 months ago
Spatio-temporal Schema Integration with Validation: A Practical Approach
We propose to enhance a schema integration process with a validation phase employing logic-based data models. In our methodology, we validate the source schemas against the data mo...
Anastasiya Sotnykova, Nadine Cullot, Christelle Va...
128
Voted
ISBI
2007
IEEE
15 years 10 months ago
Multivariate Hypothesis Testing of Dti Data for Tissue Clustering
In this work we investigate the feasibility and effectiveness of unsupervised tissue clustering and classification algorithms for DTI data. Tissue clustering and classification ...
Raisa Z. Freidlin, Yaniv Assaf, Peter J. Basser