Background: Many high-throughput genomic experiments, such as Synthetic Genetic Array and yeast two-hybrid, use colony growth on solid media as a screen metric. These experiments ...
John C. Dittmar, Robert J. D. Reid, Rodney Rothste...
We introduce a framework for defining a distance on the (non-Euclidean) space of Linear Dynamical Systems (LDSs). The proposed distance is induced by the action of the group of o...
Mean-Shift (MS) is a powerful non-parametric clustering method. Although good accuracy can be achieved, its computational cost is particularly expensive even on moderate data sets...
Background: Cluster analysis is an important technique for the exploratory analysis of biological data. Such data is often high-dimensional, inherently noisy and contains outliers...
Benjamin Georgi, Ivan Gesteira Costa, Alexander Sc...
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...