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    » A comparison of Affymetrix gene expression arrays
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    BMCBI
    2008
    98views more  BMCBI 2008»
    Empirical Bayes models for multiple probe type microarrays at the probe level
    13 years 8 months ago
    Empirical Bayes models for multiple probe type microarrays at the probe level
    Download  www.biomedcentral.com
    Background: When analyzing microarray data a primary objective is often to find differentially expressed genes. With empirical Bayes and penalized t-tests the sample variances are...
    Magnus Åstrand, Petter Mostad, Mats Rudemo
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    BMCBI
    2007
    97views more  BMCBI 2007»
    A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, hu
    13 years 8 months ago
    A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, hu
    Download  gbb.eldoc.ub.rug.nl
    Background: The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interp...
    Rudi Alberts, Peter Terpstra, Menno Hardonk, Leoni...
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    TCBB
    2010
    96views more  TCBB 2010»
    A Survey of Spatial Defects in Homo Sapiens Affymetrix GeneChips
    13 years 3 months ago
    A Survey of Spatial Defects in Homo Sapiens Affymetrix GeneChips
    Download  bioinformatics.essex.ac.uk
    Modern biology has moved from a science of individual measurements to a science where data are collected on an industrial scale. Foremost, among the new tools for biochemistry are ...
    William B. Langdon, Graham J. G. Upton, Renata da ...
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    BMCBI
    2006
    112views more  BMCBI 2006»
    Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data
    13 years 8 months ago
    Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data
    Download  www.biomedcentral.com
    Background: Gene expression microarray experiments are expensive to conduct and guidelines for acceptable quality control at intermediate steps before and after the samples are hy...
    Lesley Jones, Darlene R. Goldstein, Gareth P. Hugh...
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    BMCBI
    2005
    144views more  BMCBI 2005»
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
    13 years 8 months ago
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
    Download  www.biomedcentral.com
    Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
    Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
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