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» A complex biological database querying method
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2010
Springer
13 years 5 months ago
Talking Biology in Logic, and Back
While computation of biological information takes center stage in today’s research, knowledge-based query processing in biological databases has not gained much attention. The co...
Hasan Jamil
NAR
2011
190views Computer Vision» more  NAR 2011»
12 years 10 months ago
New tools and methods for direct programmatic access to the dbSNP relational database
Genome-wide association studies often incorporate information from public biological databases in order to provide a biological reference for interpreting the results. The dbSNP d...
Scott F. Saccone, Jiaxi Quan, Gaurang Mehta, Rapha...
TPDS
1998
112views more  TPDS 1998»
13 years 7 months ago
Parallel Computation in Biological Sequence Analysis
—A massive volume of biological sequence data is available in over 36 different databases worldwide, including the sequence data generated by the Human Genome project. These data...
Tieng K. Yap, Ophir Frieder, Robert L. Martino
SSDBM
2003
IEEE
123views Database» more  SSDBM 2003»
14 years 21 days ago
MoBIoS: A Metric-Space DBMS to Support Biological Discovery
MoBIoS is a specialized database management system whose storage manager is based on metric-space indexing, and whose query language entails biological data types. When relational...
Daniel P. Miranker, Weijia Xu, Rui Mao
BIOCOMP
2007
13 years 9 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
Xuehui Li, Tamer Kahveci