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» A complex biological database querying method
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PODS
2002
ACM
98views Database» more  PODS 2002»
14 years 7 months ago
On Propagation of Deletions and Annotations Through Views
We study two classes of view update problems in relational databases. We are given a source database S, a monotone query Q, and the view Q(S) generated by the query. The first pro...
Peter Buneman, Sanjeev Khanna, Wang Chiew Tan
BMCBI
2008
208views more  BMCBI 2008»
13 years 7 months ago
GraphFind: enhancing graph searching by low support data mining techniques
Background: Biomedical and chemical databases are large and rapidly growing in size. Graphs naturally model such kinds of data. To fully exploit the wealth of information in these...
Alfredo Ferro, Rosalba Giugno, Misael Mongiov&igra...
CSB
2004
IEEE
112views Bioinformatics» more  CSB 2004»
13 years 11 months ago
Reasoning about Molecular Similarity and Properties
Ascertaining the similarity amongst molecules is a fundamental problem in biology and drug discovery. Since similar molecules tend to have similar biological properties, the notio...
Rahul Singh
RECOMB
2005
Springer
14 years 8 months ago
Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution
Abstract. With ever increasing amount of available data on protein-protein interaction (PPI) networks and research revealing that these networks evolve at a modular level, discover...
Mehmet Koyutürk, Ananth Grama, Wojciech Szpan...
ISMB
1997
13 years 9 months ago
Standardized Representations of the Literature: Combining Diverse Sources of Ribosomal Data
We are building a knowledge base (KB) of published structural data on the 30s ribosomal subunit in prokaryotes. Our KB is distinguished by a standardized representation of biologi...
Russ B. Altman, Neil F. Abernethy, Richard O. Chen