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BMCBI
2011
13 years 1 months ago
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and proposi
Background: Remote homology detection is a hard computational problem. Most approaches have trained computational models by using either full protein sequences or multiple sequenc...
Juliana S. Bernardes, Alessandra Carbone, Gerson Z...
ICDE
2011
IEEE
234views Database» more  ICDE 2011»
12 years 10 months ago
Massively parallel XML twig filtering using dynamic programming on FPGAs
Abstract— In recent years, XML-based Publish-Subscribe Systems have become popular due to the increased demand of timely event-notification. Users (or subscribers) pose complex ...
Roger Moussalli, Mariam Salloum, Walid A. Najjar, ...
AINA
2008
IEEE
14 years 1 months ago
Missing Value Estimation for Time Series Microarray Data Using Linear Dynamical Systems Modeling
The analysis of gene expression time series obtained from microarray experiments can be effectively exploited to understand a wide range of biological phenomena from the homeostat...
Connie Phong, Raul Singh
ICML
2006
IEEE
14 years 7 months ago
Kernel Predictive Linear Gaussian models for nonlinear stochastic dynamical systems
The recent Predictive Linear Gaussian model (or PLG) improves upon traditional linear dynamical system models by using a predictive representation of state, which makes consistent...
David Wingate, Satinder P. Singh
OOPSLA
2007
Springer
14 years 25 days ago
Using hpm-sampling to drive dynamic compilation
All high-performance production JVMs employ an adaptive strategy for program execution. Methods are first executed unoptimized and then an online profiling mechanism is used to ...
Dries Buytaert, Andy Georges, Michael Hind, Matthe...