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» A computational and analysis tool for proteomics research
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BMCBI
2008
92views more  BMCBI 2008»
13 years 7 months ago
OpenMS - An open-source software framework for mass spectrometry
Background: Mass spectrometry is an essential analytical technique for high-throughput analysis in proteomics and metabolomics. The development of new separation techniques, preci...
Marc Sturm, Andreas Bertsch, Clemens Gröpl, A...
TACAS
1997
Springer
197views Algorithms» more  TACAS 1997»
13 years 11 months ago
Design/CPN - A Computer Tool for Coloured Petri Nets
In this paper, we describe the computer tool Design CPN supporting editing, simulation, and state space analysis of Coloured Petri Nets. So far, approximately 40 man-years have bee...
Søren Christensen, Jens Bæk Jø...
IPPS
2003
IEEE
14 years 27 days ago
PROSIDIS: A Special Purpose Processor for PROtein SImilarity DIScovery
This work presents the architecture of PROSIDIS, a special purpose processor designed to search for the occurrence of substrings similar to a given ‘template string’ within a ...
Alessandro Marongiu, Paolo Palazzari, Vittorio Ros...
BMCBI
2004
142views more  BMCBI 2004»
13 years 7 months ago
GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
Background: Microarray and other high-throughput technologies are producing large sets of interesting genes that are difficult to analyze directly. Bioinformatics tools are needed...
Bing Zhang, Denise Schmoyer, Stefan Kirov, Jay Sno...
BMCBI
2010
173views more  BMCBI 2010»
13 years 7 months ago
The Yeast Resource Center Public Image Repository: A large database of fluorescence microscopy images
Background: There is increasing interest in the development of computational methods to analyze fluorescent microscopy images and enable automated large-scale analysis of the subc...
Michael Riffle, Trisha N. Davis