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» A duplication growth model of gene expression networks
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IEAAIE
2010
Springer
13 years 5 months ago
Constructive Neural Networks to Predict Breast Cancer Outcome by Using Gene Expression Profiles
Abstract. Gene expression profiling strategies have attracted considerable interest from biologist due to the potential for high throughput analysis of hundreds of thousands of gen...
Daniel Urda, José Luis Subirats, Leonardo F...
BIOCOMP
2008
13 years 9 months ago
Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
BMCBI
2002
214views more  BMCBI 2002»
13 years 7 months ago
Automated modelling of signal transduction networks
Background: Intracellular signal transduction is achieved by networks of proteins and small molecules that transmit information from the cell surface to the nucleus, where they ul...
Martin Steffen, Allegra Petti, John Aach, Patrik D...
BIOSYSTEMS
2007
115views more  BIOSYSTEMS 2007»
13 years 7 months ago
Evolving fuzzy rules to model gene expression
This paper develops an algorithm that extracts explanatory rules from microarray data, which we treat as time series, using genetic programming (GP) and fuzzy logic. Reverse polis...
Ricardo Linden, Amit Bhaya
BMCBI
2008
160views more  BMCBI 2008»
13 years 7 months ago
Predicting cancer involvement of genes from heterogeneous data
Background: Systematic approaches for identifying proteins involved in different types of cancer are needed. Experimental techniques such as microarrays are being used to characte...
Ramon Aragues, Chris Sander, Baldo Oliva