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» A fast indexing approach for protein structure comparison
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BMCBI
2006
96views more  BMCBI 2006»
13 years 7 months ago
Structure alignment based on coding of local geometric measures
Background: A structure alignment method based on a local geometric property is presented and its performance is tested in pairwise and multiple structure alignments. In this appr...
Peter L. Chang, Andrew W. Rinne, T. Gregory Dewey
BMCBI
2007
144views more  BMCBI 2007»
13 years 7 months ago
Motif kernel generated by genetic programming improves remote homology and fold detection
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...
Tony Håndstad, Arne J. H. Hestnes, Pål...
GEOINFORMATICA
2006
133views more  GEOINFORMATICA 2006»
13 years 7 months ago
Indexing Fast Moving Objects for kNN Queries Based on Nearest Landmarks
With the rapid advancements in positioning technologies such as the Global Positioning System (GPS) and wireless communications, the tracking of continuously moving objects has bec...
Dan Lin, Rui Zhang 0003, Aoying Zhou
GCB
2004
Springer
139views Biometrics» more  GCB 2004»
14 years 1 months ago
Graph Alignments: A New Concept to Detect Conserved Regions in Protein Active Sites
: We introduce the novel concept of graph alignment, a generalization of graph isomorphism that is motivated by the commonly used multiple sequence alignments. Graph alignments and...
Nils Weskamp, Eyke Hüllermeier, Daniel Kuhn, ...
BMCBI
2010
103views more  BMCBI 2010»
13 years 7 months ago
Predicting the protein-protein interactions using primary structures with predicted protein surface
Background: Many biological functions involve various protein-protein interactions (PPIs). Elucidating such interactions is crucial for understanding general principles of cellula...
Darby Tien-Hao Chang, Yu-Tang Syu, Po-Chang Lin