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BMCBI
2006
101views more  BMCBI 2006»
15 years 4 months ago
How repetitive are genomes?
Background: Genome sequences vary strongly in their repetitiveness and the causes for this are still debated. Here we propose a novel measure of genome repetitiveness, the index o...
Bernhard Haubold, Thomas Wiehe
IANDC
2008
105views more  IANDC 2008»
15 years 4 months ago
Symbolic protocol analysis for monoidal equational theories
We are interested in the design of automated procedures for analyzing the (in)security of cryptographic protocols in the Dolev-Yao model for a bounded number of sessions when we t...
Stéphanie Delaune, Pascal Lafourcade, Denis...
BMCBI
2006
128views more  BMCBI 2006»
15 years 4 months ago
Rank-statistics based enrichment-site prediction algorithm developed for chromatin immunoprecipitation on chip experiments
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
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BMCBI
2007
166views more  BMCBI 2007»
15 years 4 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
JACM
2008
91views more  JACM 2008»
15 years 4 months ago
On the minimization of XPath queries
XML queries are usually expressed by means of XPath expressions identifying portions of the selected documents. An XPath expression defines a way of navigating an XML tree and ret...
Sergio Flesca, Filippo Furfaro, Elio Masciari