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BMCBI
2008
93views more  BMCBI 2008»
13 years 7 months ago
Ranking single nucleotide polymorphisms by potential deleterious effects
Identifying single nucleotide polymorphisms (SNPs) that are responsible for common and complex diseases such as cancer is of major interest in current molecular epidemiology. Howe...
Phil Hyoun Lee, Hagit Shatkay
BMCBI
2011
13 years 2 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
ICDE
2008
IEEE
125views Database» more  ICDE 2008»
14 years 9 months ago
RAD: A Scalable Framework for Annotator Development
Developments in semantic search technology have motivated the need for efficient and scalable entity annotation techniques. We demonstrate RAD: a tool for Rapid Annotator Developme...
Sanjeet Khaitan, Ganesh Ramakrishnan, Sachindra Jo...
BMCBI
2007
139views more  BMCBI 2007»
13 years 7 months ago
Bioinformatics analysis of the early inflammatory response in a rat thermal injury model
Background: Thermal injury is among the most severe forms of trauma and its effects are both local and systemic. Response to thermal injury includes cellular protection mechanisms...
Eric Yang, Timothy Maguire, Martin L. Yarmush, Fra...
BMCBI
2006
223views more  BMCBI 2006»
13 years 7 months ago
PSMIX: an R package for population structure inference via maximum likelihood method
Background: Inference of population stratification and individual admixture from genetic markers is an integrative part of a study in diverse situations, such as association mappi...
Baolin Wu, Nianjun Liu, Hongyu Zhao