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IPM
2007
123views more  IPM 2007»
13 years 7 months ago
Generating gene summaries from biomedical literature: A study of semi-structured summarization
Most knowledge accumulated through scientific discoveries in genomics and related biomedical disciplines is buried in the vast amount of biomedical literature. Since understandin...
Xu Ling, Jing Jiang, Xin He, Qiaozhu Mei, Chengxia...
BMCBI
2010
104views more  BMCBI 2010»
13 years 7 months ago
A method for automatically extracting infectious disease-related primers and probes from the literature
Background: Primer and probe sequences are the main components of nucleic acid-based detection systems. Biologists use primers and probes for different tasks, some related to the ...
Miguel García-Remesal, Alejandro Cuevas, Vi...
BMCBI
2007
163views more  BMCBI 2007»
13 years 7 months ago
A coherent graph-based semantic clustering and summarization approach for biomedical literature and a new summarization evaluati
Background: A huge amount of biomedical textual information has been produced and collected in MEDLINE for decades. In order to easily utilize biomedical information in the free t...
Illhoi Yoo, Xiaohua Hu, Il-Yeol Song
BMCBI
2005
251views more  BMCBI 2005»
13 years 7 months ago
Contextual weighting for Support Vector Machines in literature mining: an application to gene versus protein name disambiguation
Background: The ability to distinguish between genes and proteins is essential for understanding biological text. Support Vector Machines (SVMs) have been proven to be very effici...
Tapio Pahikkala, Filip Ginter, Jorma Boberg, Jouni...
BMCBI
2008
140views more  BMCBI 2008»
13 years 7 months ago
Corpus annotation for mining biomedical events from literature
Background: Advanced Text Mining (TM) such as semantic enrichment of papers, event or relation extraction, and intelligent Question Answering have increasingly attracted attention...
Jin-Dong Kim, Tomoko Ohta, Jun-ichi Tsujii