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BMCBI
2008
119views more  BMCBI 2008»
13 years 7 months ago
Snagger: A user-friendly program for incorporating additional information for tagSNP selection
Background: There has been considerable effort focused on developing efficient programs for tagging single-nucleotide polymorphisms (SNPs). Many of these programs do not account f...
Christopher K. Edlund, Won H. Lee, Dalin Li, David...
BMCBI
2007
159views more  BMCBI 2007»
13 years 7 months ago
sIR: siRNA Information Resource, a web-based tool for siRNA sequence design and analysis and an open access siRNA database
Background: RNA interference has revolutionized our ability to study the effects of altering the expression of single genes in mammalian (and other) cells through targeted knockdo...
Jyoti K. Shah, Harold R. Garner, Michael A. White,...
BMCBI
2008
93views more  BMCBI 2008»
13 years 7 months ago
A software application for comparing large numbers of high resolution MALDI-FTICR MS spectra demonstrated by searching candidate
Background: A JavaTM application is presented, which compares large numbers (n > 100) of raw FTICR mass spectra from patients and controls. Two peptide profile matrices can be ...
Mark K. Titulaer, Dana A. N. Mustafa, Ivar Siccama...
CORR
2008
Springer
174views Education» more  CORR 2008»
13 years 7 months ago
Bounded Budget Connection (BBC) Games or How to make friends and influence people, on a budget
Motivated by applications in social networks, peer-to-peer and overlay networks, we define and study the Bounded Budget Connection (BBC) game - we have a collection of n players o...
Nikolaos Laoutaris, Laura J. Poplawski, Rajmohan R...
BMCBI
2006
112views more  BMCBI 2006»
13 years 7 months ago
Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data
Background: Gene expression microarray experiments are expensive to conduct and guidelines for acceptable quality control at intermediate steps before and after the samples are hy...
Lesley Jones, Darlene R. Goldstein, Gareth P. Hugh...
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