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RECOMB
2003
Springer
14 years 7 months ago
On de novo interpretation of tandem mass spectra for peptide identification
The correct interpretation of tandem mass spectra is a difficult problem, even when it is limited to scoring peptides against a database. De novo sequencing is considerably harder...
Vineet Bafna, Nathan Edwards
IJISEC
2006
106views more  IJISEC 2006»
13 years 7 months ago
Execution transactions for defending against software failures: use and evaluation
We examine the problem of containing buffer overflow attacks in a safe and efficient manner. Briefly, we automatically augment source code to dynamically catch stack and heap-based...
Stelios Sidiroglou, Angelos D. Keromytis
SAC
2008
ACM
13 years 6 months ago
Implementing Java modeling language contracts with AspectJ
The Java Modeling Language (JML) is a behavioral interface specification language (BISL) designed for Java. It was developed to improve functional software correctness of Java app...
Henrique Rebêlo, Sérgio Soares, Ricar...
BMCBI
2005
90views more  BMCBI 2005»
13 years 7 months ago
TMB-Hunt: An amino acid composition based method to screen proteomes for beta-barrel transmembrane proteins
Background: Beta-barrel transmembrane (bbtm) proteins are a functionally important and diverse group of proteins expressed in the outer membranes of bacteria (both gram negative a...
Andrew G. Garrow, Alison Agnew, David R. Westhead
EMSOFT
2005
Springer
14 years 25 days ago
Passive mid-stream monitoring of real-time properties
Passive monitoring or testing of complex systems and networks running in the field can provide valuable insights into their behavior in actual environments of use. In certain con...
Lalita Jategaonkar Jagadeesan, Ramesh Viswanathan