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» A new approach to fragment assembly in DNA sequencing
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BIOINFORMATICS
2004
86views more  BIOINFORMATICS 2004»
13 years 6 months ago
Transposable element annotation of the rice genome
Motivation: The high content of repetitive sequences in the genomes of many higher eukaryotes renders the task of annotating them computationally intensive. Presently, the only wi...
Nikoleta Juretic, Thomas E. Bureau, Richard M. Bru...
SAIG
2001
Springer
13 years 11 months ago
MetaKlaim: Meta-programming for Global Computing
Most foundational models for global computing have focused on the spatial dimension of computations, however global computing requires also new ways of thinking about the temporal ...
Gian Luigi Ferrari, Eugenio Moggi, Rosario Puglies...
BMCBI
2008
138views more  BMCBI 2008»
13 years 6 months ago
Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics
Background: The availability of sequences from whole genomes to reconstruct the tree of life has the potential to enable the development of phylogenomic hypotheses in ways that ha...
Indra Neil Sarkar, Mary G. Egan, Gloria M. Coruzzi...
BMCBI
2007
163views more  BMCBI 2007»
13 years 6 months ago
Strainer: software for analysis of population variation in community genomic datasets
Background: Metagenomic analyses of microbial communities that are comprehensive enough to provide multiple samples of most loci in the genomes of the dominant organism types will...
John M. Eppley, Gene W. Tyson, Wayne M. Getz, Jill...
BMCBI
2008
118views more  BMCBI 2008»
13 years 6 months ago
PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
Background: Pseudogenes, nonfunctional copies of genes, evolve fast due the lack of evolutionary pressures and thus appear in several different forms. PseudoGeneQuest is an online...
Csaba P. Ortutay, Mauno Vihinen