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» A new approach to nonrepetitive sequences
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SIGGRAPH
1998
ACM
13 years 11 months ago
Visibility Sorting and Compositing Without Splitting for Image Layer Decompositions
We present an efficient algorithm for visibility sorting a set of moving geometric objects into a sequence of image layers which are composited to produce the final image. Inste...
John M. Snyder, Jed Lengyel
SDM
2004
SIAM
214views Data Mining» more  SDM 2004»
13 years 8 months ago
Making Time-Series Classification More Accurate Using Learned Constraints
It has long been known that Dynamic Time Warping (DTW) is superior to Euclidean distance for classification and clustering of time series. However, until lately, most research has...
Chotirat (Ann) Ratanamahatana, Eamonn J. Keogh
BMCBI
2007
154views more  BMCBI 2007»
13 years 7 months ago
Cinteny: flexible analysis and visualization of synteny and genome rearrangements in multiple organisms
Background: Identifying syntenic regions, i.e., blocks of genes or other markers with evolutionary conserved order, and quantifying evolutionary relatedness between genomes in ter...
Amit U. Sinha, Jaroslaw Meller
IPPS
2010
IEEE
13 years 4 months ago
Hybrid MPI/Pthreads parallelization of the RAxML phylogenetics code
Abstract--A hybrid MPI/Pthreads parallelization was implemented in the RAxML phylogenetics code. New MPI code was added to the existing Pthreads production code to exploit parallel...
Wayne Pfeiffer, Alexandros Stamatakis
BMCBI
2010
112views more  BMCBI 2010»
13 years 7 months ago
Computational identification of rare codons of Escherichia coli based on codon pairs preference
Background: Codon bias is believed to play an important role in the control of gene expression. In Escherichia coli, some rare codons, which can limit the expression level of exog...
Xianming Wu, Songfeng Wu, Dong Li, Jiyang Zhang, L...