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» A new approach to nonrepetitive sequences
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BMCBI
2004
94views more  BMCBI 2004»
13 years 10 months ago
GASP: Gapped Ancestral Sequence Prediction for proteins
Background: The prediction of ancestral protein sequences from multiple sequence alignments is useful for many bioinformatics analyses. Predicting ancestral sequences is not a sim...
Richard J. Edwards, Denis C. Shields
DATE
2000
IEEE
93views Hardware» more  DATE 2000»
14 years 2 months ago
Fast Evaluation of Sequence Pair in Block Placement by Longest Common Subsequence Computation
In [1], Murata et al introduced an elegant representation of block placement called sequence pair. All block placement algorithms which are based on sequence pairs use simulated a...
Xiaoping Tang, D. F. Wong, Ruiqi Tian
JCDL
2004
ACM
170views Education» more  JCDL 2004»
14 years 3 months ago
Looking for new, not known music only: music retrieval by melody style
With the growth of digital music, content-based music retrieval (CBMR) has attracted increasingly attention. For most CBMR systems, the task is to return music objects similar to ...
Fang-Fei Kuo, Man-Kwan Shan
BMCBI
2006
203views more  BMCBI 2006»
13 years 10 months ago
Independent component analysis reveals new and biologically significant structures in micro array data
Background: An alternative to standard approaches to uncover biologically meaningful structures in micro array data is to treat the data as a blind source separation (BSS) problem...
Attila Frigyesi, Srinivas Veerla, David Lindgren, ...
RECOMB
2002
Springer
14 years 10 months ago
Deconvolving sequence variation in mixed DNA populations
We present an original approach to identifying sequence variants in a mixed DNA population from sequence trace data. The heart of the method is based on parsimony: given a wildtyp...
Andy Wildenberg, Steven Skiena, Pavel Sumazin