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CEC
2011
IEEE
12 years 7 months ago
Cost-benefit analysis of using heuristics in ACGP
—Constrained Genetic Programming (CGP) is a method of searching the Genetic Programming search space non-uniformly, giving preferences to certain subspaces according to some heur...
John W. Aleshunas, Cezary Z. Janikow
RECOMB
2006
Springer
14 years 7 months ago
A Parsimony Approach to Genome-Wide Ortholog Assignment
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
CIE
2007
Springer
13 years 11 months ago
A Classification of Viruses Through Recursion Theorems
We study computer virology from an abstract point of view. Viruses and worms are self-replicating programs, whose constructions are essentially based on Kleene's second recurs...
Guillaume Bonfante, Matthieu Kaczmarek, Jean-Yves ...
BMCBI
2010
139views more  BMCBI 2010»
13 years 7 months ago
A global optimization algorithm for protein surface alignment
Background: A relevant problem in drug design is the comparison and recognition of protein binding sites. Binding sites recognition is generally based on geometry often combined w...
Paola Bertolazzi, Concettina Guerra, Giampaolo Liu...
PODS
2006
ACM
137views Database» more  PODS 2006»
14 years 7 months ago
Data exchange: computing cores in polynomial time
Data exchange deals with inserting data from one database into another database having a different schema. We study and solve a central computational problem of data exchange, nam...
Georg Gottlob, Alan Nash