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BMCBI
2008
228views more  BMCBI 2008»
13 years 7 months ago
Adaptive diffusion kernel learning from biological networks for protein function prediction
Background: Machine-learning tools have gained considerable attention during the last few years for analyzing biological networks for protein function prediction. Kernel methods a...
Liang Sun, Shuiwang Ji, Jieping Ye
NN
2010
Springer
189views Neural Networks» more  NN 2010»
13 years 2 months ago
Sparse kernel learning with LASSO and Bayesian inference algorithm
Kernelized LASSO (Least Absolute Selection and Shrinkage Operator) has been investigated in two separate recent papers (Gao et al., 2008) and (Wang et al., 2007). This paper is co...
Junbin Gao, Paul W. Kwan, Daming Shi
ICANN
2007
Springer
14 years 1 months ago
Incremental and Decremental Learning for Linear Support Vector Machines
Abstract. We present a method to find the exact maximal margin hyperplane for linear Support Vector Machines when a new (existing) component is added (removed) to (from) the inner...
Enrique Romero, Ignacio Barrio, Lluís Belan...
NIPS
2004
13 years 9 months ago
A Topographic Support Vector Machine: Classification Using Local Label Configurations
The standard approach to the classification of objects is to consider the examples as independent and identically distributed (iid). In many real world settings, however, this ass...
Johannes Mohr, Klaus Obermayer
BMCBI
2010
88views more  BMCBI 2010»
13 years 7 months ago
Proteome scanning to predict PDZ domain interactions using support vector machines
Background: PDZ domains mediate protein-protein interactions involved in important biological processes through the recognition of short linear motifs in their target proteins. Tw...
Shirley Hui, Gary D. Bader