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RECOMB
2006
Springer
14 years 8 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
SPAA
2006
ACM
14 years 1 months ago
Playing push vs pull: models and algorithms for disseminating dynamic data in networks
Consider a network in which a collection of source nodes maintain and periodically update data objects for a collection of sink nodes, each of which periodically accesses the data...
R. C. Chakinala, Abishek Kumarasubramanian, Kofi A...
SODA
1990
ACM
114views Algorithms» more  SODA 1990»
13 years 8 months ago
Finding Steiner Forests in Planar Graphs
Given an unweighted planar graph G together with nets of terminals, our problem is to find a Steiner forest, i.e., vertex-disjoint trees, each of which interconnects all the termin...
Hitoshi Suzuki, Takehiro Akama, Takao Nishizeki
IPPS
2003
IEEE
14 years 29 days ago
Master-slave Tasking on Heterogeneous Processors
In this paper, we consider the problem of scheduling independent identical tasks on heterogeneous processors where communication times and processing times are different. We assum...
Pierre-François Dutot
STOC
2005
ACM
138views Algorithms» more  STOC 2005»
14 years 1 months ago
A new strategy for querying priced information
This paper focuses on competitive function evaluation in the context of computing with priced information. A function f is given together with a cost cx for each variable x of f. ...
Ferdinando Cicalese, Eduardo Sany Laber