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BMCBI
2011
14 years 11 months ago
Tiling array data analysis: a multiscale approach using wavelets
Background: Tiling array data is hard to interpret due to noise. The wavelet transformation is a widely used technique in signal processing for elucidating the true signal from no...
Alexander Karpikov, Joel S. Rozowsky, Mark Gerstei...
PLDI
2009
ACM
15 years 10 months ago
Snugglebug: a powerful approach to weakest preconditions
Symbolic analysis shows promise as a foundation for bug-finding, specification inference, verification, and test generation. This paper addresses demand-driven symbolic analysi...
Satish Chandra, Stephen J. Fink, Manu Sridharan
BMCBI
2005
152views more  BMCBI 2005»
15 years 3 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
TCAD
2008
103views more  TCAD 2008»
15 years 3 months ago
Topology-Based Performance Analysis and Optimization of Latency-Insensitive Systems
Latency-insensitive protocols allow system-on-chip (SoC) engineers to decouple the design of the computing cores from the design of the intercore communication channels while follo...
Rebecca L. Collins, Luca P. Carloni
ISBRA
2010
Springer
15 years 10 months ago
"Master-Slave" Biological Network Alignment
d abstract), Nicola Ferraro, Luigi Palopoli, Simona Panni and Simona E. Rombo. Uncovering Hidden Phylogenetic Consensus d abstract), Nicholas Pattengale, Krister Swenson and Bernar...
Nicola Ferraro, Luigi Palopoli, Simona Panni, Simo...