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» A scalable algorithm for clustering protein sequences
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BMCBI
2010
101views more  BMCBI 2010»
13 years 7 months ago
Enrichment of homologs in insignificant BLAST hits by co-complex network alignment
Background: Homology is a crucial concept in comparative genomics. The algorithm probably most widely used for homology detection in comparative genomics, is BLAST. Usually a stri...
Like Fokkens, Sandra M. C. Botelho, Jos Boekhorst,...
SIGMOD
2010
ACM
321views Database» more  SIGMOD 2010»
13 years 12 months ago
HadoopDB in action: building real world applications
HadoopDB is a hybrid of MapReduce and DBMS technologies, designed to meet the growing demand of analyzing massive datasets on very large clusters of machines. Our previous work ha...
Azza Abouzied, Kamil Bajda-Pawlikowski, Jiewen Hua...
CSB
2003
IEEE
121views Bioinformatics» more  CSB 2003»
14 years 9 days ago
Epitope Prediction Algorithms for Peptide based Vaccine Design
Peptide-based vaccines, in which small peptides derived from target proteins (epitopes) are used to provoke an immune reaction, have attracted considerable attention recently as a...
Liliana Florea, Bjarni V. Halldórsson, Oliv...
DKE
2006
125views more  DKE 2006»
13 years 7 months ago
Online clustering of parallel data streams
In recent years, the management and processing of so-called data streams has become a topic of active research in several fields of computer science such as, e.g., distributed sys...
Jürgen Beringer, Eyke Hüllermeier
RECOMB
2009
Springer
14 years 7 months ago
Spatial Clustering of Multivariate Genomic and Epigenomic Information
The combination of fully sequence genomes and new technologies for high density arrays and ultra-rapid sequencing enables the mapping of generegulatory and epigenetics marks on a g...
Rami Jaschek, Amos Tanay