110 search results - page 8 / 22 » A scalable algorithm for clustering protein sequences |
CONSTRAINTS
2008
13 years 8 months ago
2008
Aligning DNA and protein sequences is a core technique in molecular biology. Often, it is desirable to include partial prior knowledge and conditions in an alignment. Going beyond...
BIB
2008
13 years 8 months ago
2008
The accuracy and scalability of multiple sequence alignment (MSA) of DNAs and proteins have long been and are still important issues in bioinformatics. To rapidly construct a reas...
NAR
2011
12 years 10 months ago
2011
We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
BMCBI
2008
13 years 8 months ago
2008
Background: Structural similarities among proteins can provide valuable insight into their functional mechanisms and relationships. As the number of available three-dimensional (3...
JMLR
2012
11 years 10 months ago
2012
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model...