70 search results - page 5 / 14 » A simple and fast heuristic for protein structure comparison |
CSR
2006
Springer
14 years 7 days ago
2006
Springer
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
BMCBI
2007
13 years 8 months ago
2007
Background: Mass spectrometry based peptide mass fingerprints (PMFs) offer a fast, efficient, and robust method for protein identification. A protein is digested (usually by tryps...
PRIB
2010
Springer
13 years 6 months ago
2010
Springer
Abstract. An important unsolved problem in structural bioinformatics is that of protein structure prediction (PSP), the reconstruction of a biologically plausible three-dimensional...
JCB
2008
13 years 8 months ago
2008
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
VLSM
2005
Springer
14 years 2 months ago
2005
Springer
In this paper we present a simple modification of the Fast Marching algorithm to speed up the computation using a heuristic. This modification leads to an algorithm that is simil...