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» A statistical approach for array CGH data analysis
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BMCBI
2007
156views more  BMCBI 2007»
13 years 9 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...
SIGMOD
2010
ACM
598views Database» more  SIGMOD 2010»
14 years 1 months ago
Ricardo: integrating R and Hadoop
Many modern enterprises are collecting data at the most detailed level possible, creating data repositories ranging from terabytes to petabytes in size. The ability to apply sophi...
Sudipto Das, Yannis Sismanis, Kevin S. Beyer, Rain...
ICDM
2007
IEEE
166views Data Mining» more  ICDM 2007»
14 years 3 months ago
Mining Statistical Information of Frequent Fault-Tolerant Patterns in Transactional Databases
Constraints applied on classic frequent patterns are too strict and may cause interesting patterns to be missed. Hence, researchers have proposed to mine a more relaxed version of...
Ardian Kristanto Poernomo, Vivekanand Gopalkrishna...
BMCBI
2006
180views more  BMCBI 2006»
13 years 9 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
BMCBI
2006
155views more  BMCBI 2006»
13 years 9 months ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...