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COMPLEX
2009
Springer
14 years 3 months ago
Comparing Networks from a Data Analysis Perspective
To probe network characteristics, two predominant ways of network comparison are global property statistics and subgraph enumeration. However, they suffer from limited information...
Wei Li, Jing-Yu Yang
BMCBI
2010
132views more  BMCBI 2010»
13 years 8 months ago
Parallel multiplicity and error discovery rate (EDR) in microarray experiments
Background: In microarray gene expression profiling experiments, differentially expressed genes (DEGs) are detected from among tens of thousands of genes on an array using statist...
Wayne Wenzhong Xu, Clay J. Carter
CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
14 years 2 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...
BMCBI
2008
132views more  BMCBI 2008»
13 years 8 months ago
Very Important Pool (VIP) genes - an application for microarray-based molecular signatures
Background: Advances in DNA microarray technology portend that molecular signatures from which microarray will eventually be used in clinical environments and personalized medicin...
Zhenqiang Su, Huixiao Hong, Hong Fang, Leming M. S...
BMCBI
2010
172views more  BMCBI 2010»
13 years 8 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane