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DMKD
2003
ACM
110views Data Mining» more  DMKD 2003»
14 years 27 days ago
Weave amino acid sequences for protein secondary structure prediction
Given a known protein sequence, predicting its secondary structure can help understand its three-dimensional (tertiary) structure, i.e., the folding. In this paper, we present an ...
Xiaochun Yang, Bin Wang
ICPR
2004
IEEE
14 years 8 months ago
Relaxation Labeling Processes for Protein Secondary Structure Prediction
The prediction of protein secondary structure is a classical problem in bioinformatics, and in the past few years several machine learning techniques have been proposed to t. From...
Giacomo Colle, Marcello Pelillo
ECCV
2010
Springer
14 years 1 months ago
Optimizing Complex Loss Functions in Structured Prediction
Abstract. In this paper we develop an algorithm for structured prediction that optimizes against complex performance measures, those which are a function of false positive and fals...
ACL
2007
13 years 9 months ago
Learning Predictive Structures for Semantic Role Labeling of NomBank
This paper presents a novel application of Alternating Structure Optimization (ASO) to the task of Semantic Role Labeling (SRL) of noun predicates in NomBank. ASO is a recently pr...
Chang Liu, Hwee Tou Ng
BMCBI
2007
153views more  BMCBI 2007»
13 years 7 months ago
Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
Background: In ribonucleic acid (RNA) molecules whose function depends on their final, folded three-dimensional shape (such as those in ribosomes or spliceosome complexes), the se...
Amelia B. Bellamy-Royds, Marcel Turcotte