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» A supertree method for rooted trees
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PR
2007
81views more  PR 2007»
13 years 7 months ago
Graph embedding using tree edit-union
In this paper we address the problem of how to learn a structural prototype that can be used to represent the variations present in a set of trees. The prototype serves as a patte...
Andrea Torsello, Edwin R. Hancock
WABI
2009
Springer
127views Bioinformatics» more  WABI 2009»
14 years 2 months ago
Constructing Majority-Rule Supertrees
Background: Supertree methods combine the phylogenetic information from multiple partially-overlapping trees into a larger phylogenetic tree called a supertree. Several supertree ...
Jianrong Dong, David Fernández-Baca, Fred R...
DAM
2010
112views more  DAM 2010»
13 years 7 months ago
New results on optimizing rooted triplets consistency
Abstract. A set of phylogenetic trees with overlapping leaf sets is consistent if it can be merged without conflicts into a supertree. In this paper, we study the polynomial-time a...
Jaroslaw Byrka, Sylvain Guillemot, Jesper Jansson
TCIAIG
2010
13 years 2 months ago
Evaluating Root Parallelization in Go
Abstract--Parallelizing Monte-Carlo tree search has been considered to be a way to improve the strength of computer Go programs. In this paper, we analyze the performance of two ro...
Yusuke Soejima, Akihiro Kishimoto, Osamu Watanabe
RECOMB
2011
Springer
12 years 10 months ago
Algorithms for MDC-Based Multi-locus Phylogeny Inference
One of the criteria for inferring a species tree from a collection of gene trees, when gene tree incongruence is assumed to be due to incomplete lineage sorting (ILS), is minimize ...
Yun Yu, Tandy Warnow, Luay Nakhleh