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ISMB
1994
13 years 11 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe
NAR
2006
156views more  NAR 2006»
13 years 9 months ago
VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees
Variable order Markov models and variable order Bayesian trees have been proposed for the recognition of transcription factor binding sites, and it could be demonstrated that they...
Jan Grau, Irad E. Ben-Gal, Stefan Posch, Ivo Gross...
AINA
2009
IEEE
14 years 4 months ago
Predictive Simulation of HPC Applications
The architectures which support modern supercomputing machinery are as diverse today, as at any point during the last twenty years. The variety of processor core arrangements, thr...
Simon D. Hammond, J. A. Smith, Gihan R. Mudalige, ...
HIPC
2007
Springer
14 years 4 months ago
Experiments with a Parallel External Memory System
Abstract. The theory of bulk-synchronous parallel computing has produced a large number of attractive algorithms, which are provably optimal in some sense, but typically require th...
Mohammad R. Nikseresht, David A. Hutchinson, Anil ...
IPPS
2005
IEEE
14 years 3 months ago
Technology-based Architectural Analysis of Operand Bypass Networks for Efficient Operand Transport
As semiconductor feature sizes decrease, interconnect delay is becoming a dominant component of processor cycle times. This creates a critical need to shift microarchitectural des...
Hongkyu Kim, D. Scott Wills, Linda M. Wills